Kuhn GCS,
Heringer P, Dias GB (2021). Structure,
organization, and evolution of satellite DNAs:
Insights from the Drosophila repleta and
D. virilis species groups. Prog Mol
Subcell Biol. 60:27-56. doi:
10.1007/978-3-030-74889-0_2.
Valeri MP, Dias GB, do Espírito Santo AA,
Moreira CN, Yonenaga-Yassuda Y, Sommer IB, Kuhn
GCS, Svartman M (2021). First
Description of a Satellite DNA in Manatees'
Centromeric Regions. Front Genet. 12:694866.
doi: 10.3389/fgene.2021.694866.
Dias CAR, Kuhn GCS, Svartman M, Santos Júnior
JED, Santos FR, Pinto CM, Perini FA (2021).
Identification and characterization of
repetitive DNA in the genus Didelphis Linnaeus,
1758 (Didelphimorphia, Didelphidae) and the use
of satellite DNAs as phylogenetic markers. Genet
Mol Biol. 44(2):e20200384. doi:
10.1590/1678-4685-GMB-2020-0384.
Araújo NP, Sena RS, Bonvicino CR, Kuhn GCS,
Svartman M (2021). SINE-B1 Distribution
and Chromosome Rearrangements in the South
American Proechimys gr. goeldii (Echimyidae,
Rodentia). Cytogenet Genome Res. 161(1-2):6-13.
doi: 10.1159/000513106.
Sena RS, Heringer P, Valeri MP, Pereira VS, Kuhn
GCS, Svartman M (2020). Identification
and characterization of satellite DNAs in
two-toed sloths of the genus Choloepus
(Megalonychidae, Xenarthra). Sci Rep.
10(1):19202. doi: 10.1038/s41598-020-76199-8.
Nascimento AML, Silva BSML, Svartman M, Kuhn GCS
(2020). Tracking a recent horizontal
transfer event: The P-element reaches Brazilian
populations of Drosophila simulans. Genet Mol
Biol. 43(2):e20190342. doi:
10.1590/1678-4685-GMB-2019-0342.
Valeri MP, Dias GB, Moreira CN, Yonenaga-Yassuda
Y, Stanyon R, Kuhn GCS, Svartman M (2020).
Characterization of Satellite DNAs in Squirrel
Monkeys genus Saimiri (Cebidae, Platyrrhini).
Sci Rep. 2020 May 8;10(1):7783. doi:
10.1038/s41598-020-64620-1. Erratum in: Sci Rep.
2020 Aug 6;10(1):13501.
Silva BSML, Heringer P, Dias GB, Svartman M,
Kuhn GCS (2019). De novo identification
of satellite DNAs in the sequenced genomes of Drosophila
virilis and D. americana using the
RepeatExplorer and TAREAN pipelines. PLoS One.
14(12):e0223466. doi:
10.1371/journal.pone.0223466.
Heringer P, Kuhn GCS (2018). Exploring
the Remote Ties between Helitron Transposases
and Other Rolling-Circle Replication Proteins.
Int J Mol Sci. 9;19(10). pii: E3079. doi:
10.3390/ijms19103079.
Teixeira JR, Dias GB, Svartman M, Ruiz. A, Kuhn
GCS (2018). Concurrent Duplication of
Drosophila Cid and Cenp-C Genes Resulted in
Accelerated Evolution and Male Germline-Biased
Expression of the New Copies. J. Mol. Evol.
86(6) 353–364.
Valeri MP, Dias GB, Pereira VS, Kuhn GCS,
Svartman M. (2018). An eutherian
intronic sequence gave rise to a major satellite
DNA in Platyrrhini. Biology Letters 14(1). doi:
10.1098/rsbl.2017.0686.
Heringer P, Dias GB, Kuhn GCS. (2017).
A Horizontally Transferred Autonomous
Helitron Became a Full Polydnavirus Segment in
Cotesia vestalis. G3 (Bethesda). doi:
10.1534/g3.117.300280.
de Lima L. Svartman M, Kuhn G. (2017).
Dissecting the Satellite DNA Landscape in
Three Cactophilic Drosophila Sequenced
Genomes. G3-Genes Genomes Genetics, 7(8)
2831-2843.
https://doi.org/10.1534/g3.117.042093.
Palacios-Gimenez O , Dias GB, de lima LG, Kuhn
GCS, Ramos E, Martins C, Cabral-de-Mello D. (2017).
High-throughput analysis of the
satellitome revealed enormous diversity of
satellite dnas in the neo-y chromosome of the
cricket Eneoptera surinamensis.
Scientific Reports 7(1)6422. doi:
10.1038/s41598-017-06822-8.
Araújo NP, de lima L, Dias GB, Kuhn GCS, de
Melo AL, Yonenaga-Yassuda Y, Stanyon R,
Svartman M. (2017). Identification and
characterization of a subtelomeric satellite
DNA in Callitrichini monkeys. DNA RESEARCH,
24(4): 377-385.
Araújo NP, Kuhn GCS, Vieira FN, Morcatty TQ,
Paglia AP, Svartman M. (2017).
Comparative Genomic In Situ Hybridization and
the Possible Role of Retroelements in the
Karyotypic Evolution of Three Akodontini
Species. Int. J. Genomics. doi:
10.1155/2017/5935380.
Araújo NP, Dias GB, Amaro BD, Kuhn GCS,
Svartman M (2016). The complete
mitochondrial genomes of two Atlantic spiny
rats, genus Trinomys (Rodentia: Echimyidae),
from low-pass shotgun sequencing. Gene Reports
(5)18-22. doi: 10.1016/j.genrep.2016.08.003.
Dias BB, Heringer P, Kuhn GCS (2016). Helitrons
in Drosophila: chromatin modulation and tandem
insertions. Mobile
Genetic Elements doi:
10.1080/2159256X.2016.1154638 Dias BB, Heringer P, Svartman M, Kuhn GCS (2015). Helitrons
shaping the genomic architecture of Drosophila:
enrichment of DINE-TR1 in α and
β-heterochromatin, satellite DNA emergence and
piRNA expression. Chromosome Resdoi:10.1007/s10577-015-9480-x
Kuhn GCS
(2015). Satellite DNA transcripts have
diverse biological roles in Drosophila. Heredity.
doi:10.1038/ddy.2015.12
Guillén Y, Rius N, Delprat A, Williford A, Muyas
F, Puig M, Casillas S, Rŕmia M, Egea R, Negre B,
Mir N, Camps J, Moncunill V, Ruiz-Ruano FJ,
Cabrero J, de Lima LG, Dias GB, Ruiz JC,Kapusta
A,
Garcia-Mas J, Gut M, Gut IG, Torrents D, Camacho
JPM, Kuhn GCS, Feschotte C, Clark AG, Betrán E,
Barbadilla A, Ruiz A. (2015). Genomics of ecological
adaptation in cactophilic Drosophila. Genome Biol Evol
7(1): 349-366.
Dias GB, Svartman M, Delprat A, Ruiz A, Kuhn GCS
(2014).
Tetris is a foldback transposon that provided
the building blocks for an emerging satellite
DNA of Drosophila
virilis. Genome Biol Evol 6(6):1302-1313.
doi: 10.1093/gbe/evu108
Kuhn GCS, Kuettler H,
Moreira-Filho O, Heslop-Harrison JS (2012). The
1.688 repetitive DNA of Drosophila:
Concerted evolution at different genomic scales
and association with genes. Mol Biol Evol
29(1): 7-11 doi:10.1093/molbev/msr173.
Lui RL, Blanco DR, Margarido VP, Kuhn GC, Gomes
VN, Prioli AJ, Moreira-Filho O. (2012).
A recent transposition of river involving Paraná
and Săo Francisco basins: effects on the genetic
variability and structure of the neotropical
fish Parauchenipterus galeatus (Siluriformes,
Auchenipteridae). Mitochondrial DNA23(5):388-95.
doi: 10.3109/19401736.2012.690747.
Kuhn GCS, Heslop-Harrison JS(2011). Characterization
and genomic organization of PERI, a repetitive DNA
in the Drosophila buzzatii
cluster related to DINE-1 transposable elements
and highly abundant in the sex chromosomes. Cytogenet Genome Res 132: 79-88.
Kuhn GCS, Schwarzacher T,
Heslop-Harrison JS (2010). The non-regular orbit:
Three satellite DNAs in Drosophila
martensis (buzzatii complex,
repleta group) followed three
different evolutionary pathways. Mol
Genet Genomics284: 251-262.
Kuhn GCS(2010). Centromeres: Structure and
Function (Book Review).
Annals of Botany105:
IX-XI.
Kuhn GCS, Teo CH. Schwarzacher T,
Heslop-Harrison JS (2009). Evolutionary dynamics and
sites of illegitimate recombination revealed in
the interspersion and sequence junctions of two
nonhomologous satellite DNAs in Drosophila
species. Heredity 102: 453-464.
Kuhn GCS, Sene FM, Moreira-Filho O,
Schwarzacher T, Heslop-Harrison JS (2008).
Sequence analysis, chromosomal distribution and
long-range organization show that rapid turnover
of new and old pBuM satellite DNA repeats leads to
different patterns of variation in seven species
of the Drosophila buzzatii cluster. Chromosome
Res 16(2): 307-324.
Kuhn GCS, Franco, FF, Manfrin MH,
Moreira-Filho O, Sene FM (2007). Low
rates of homogenization of the DBC-150 satellite
DNA family restricted to a single pair of
microchromosomes in species from the Drosophila
buzzatii cluster. Chromosome Res
15(4): 457-470.
Franco FF, Kuhn GCS, Sene FM,
Manfrin MH (2006).
Conservation of pBuM-2 satellite DNA sequences in
isolated populations of Drosophila gouveai
from Brazil. Genetica 128(1-3): 287-95.
Kuhn GCS, Sene FM (2005). Evolutionary
turnover of two pBuM satellite DNA subfamilies in
the Drosophila buzzatii species cluster (repleta
group): from alpha to alpha/beta arrays. Gene
349: 77-85.
Kuhn GCS, Sene FM (2004). Characterisation
and interpopulation variability of a complex HpaI
satellite DNA of Drosophila seriema (repleta
group). Genetica 121(3): 241-249.
Kuhn GCS, Franco FF, Silva
Jr WA, Rossi NMM, Sene FM (2003). On the
pBuM189 satDNA variability in D. buzzatii
populations in South-America. Hereditas
139: 161-166.
Ruiz A, Cassian A, Kuhn GCS, Alves
MAR, Sene FM (2000).
The Drosophila serido speciation puzzle:
putting new pieces together. Genetica
108: 217-227.
Costa CTA, Kuhn GCS, Sene FM
(2000).
Low courtship song variation in south and
southeastern brazilian populations of Drosophila
meridionalis (Diptera, Drosophilidae). Revta
Brasil Biol 60(1): 53-61.
Kuhn GCS, Bollgönn S, Sperlich D,
Bachmann L (1999).
Characterization of a species-specific satellite
DNA of Drosophila buzzatii. J Zool
Syst Evol Res 37: 109-112.
Kuhn GCS, Ruiz A, Alves MAR, Sene
FM (1996). The
metaphase and polytene chromosomes of Drosophila
seriema (repleta group; mulleri
subgroup). Brazilian J Genetics 19: 209-216.